STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY85040.1PFAM: Calcineurin-like phosphoesterase. (601 aa)    
Predicted Functional Partners:
AFY80257.1
Hypothetical protein.
  
     0.659
AFY81699.1
Acetyltransferase, N-acetylglutamate synthase; PFAM: Acetyltransferase (GNAT) family.
 
     0.658
AFY82228.1
Hypothetical protein.
  
     0.650
AFY83221.1
Hypothetical protein; PFAM: Uncharacterised BCR, COG1649.
  
     0.630
AFY84860.1
Hypothetical protein.
  
    0.592
ycf12
Photosystem II complex subunit Ycf12; A core subunit of photosystem II (PSII); Belongs to the Ycf12 family.
  
     0.579
AFY81189.1
Hypothetical protein.
  
 
   0.566
AFY82361.1
Hypothetical protein.
  
     0.555
AFY83611.1
Hypothetical protein.
  
     0.553
AFY79868.1
Ankyrin repeat-containing protein; PFAM: Ankyrin repeat.
  
 
 
 0.532
Your Current Organism:
Oscillatoria acuminata
NCBI taxonomy Id: 56110
Other names: Microcoleus vaginatus KFRI M-7.1.1, O. acuminata PCC 6304, Oscillatoria acuminata PCC 6304, Oscillatoria sp. ATCC 27930, Oscillatoria sp. PCC 6304
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