Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY79867.1 | AFY80191.1 | Oscil6304_0110 | Oscil6304_0444 | Hypothetical protein. | PFAM: PAP_fibrillin. | 0.754 |
AFY79867.1 | AFY80970.1 | Oscil6304_0110 | Oscil6304_1256 | Hypothetical protein. | Hypothetical protein. | 0.765 |
AFY79867.1 | AFY81252.1 | Oscil6304_0110 | Oscil6304_1550 | Hypothetical protein. | PFAM: Protein of unknown function (DUF3007). | 0.759 |
AFY79867.1 | AFY83735.1 | Oscil6304_0110 | Oscil6304_4207 | Hypothetical protein. | Putative membrane protein; PFAM: NnrU protein; manually curated. | 0.771 |
AFY79867.1 | AFY83926.1 | Oscil6304_0110 | Oscil6304_4406 | Hypothetical protein. | PFAM: Protein of unknown function (DUF1350). | 0.773 |
AFY79867.1 | AFY84214.1 | Oscil6304_0110 | Oscil6304_4703 | Hypothetical protein. | PFAM: Protein of unknown function (DUF3611). | 0.755 |
AFY79867.1 | AFY84884.1 | Oscil6304_0110 | Oscil6304_5396 | Hypothetical protein. | PFAM: Manganese-stabilising protein / photosystem II polypeptide. | 0.773 |
AFY79867.1 | AFY84917.1 | Oscil6304_0110 | Oscil6304_5431 | Hypothetical protein. | Ferredoxin-thioredoxin reductase, catalytic subunit; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | 0.768 |
AFY79867.1 | AFY85325.1 | Oscil6304_0110 | Oscil6304_5858 | Hypothetical protein. | PFAM: BT1 family; TIGRFAM: folate/biopterin transporter. | 0.723 |
AFY80191.1 | AFY79867.1 | Oscil6304_0444 | Oscil6304_0110 | PFAM: PAP_fibrillin. | Hypothetical protein. | 0.754 |
AFY80191.1 | AFY80424.1 | Oscil6304_0444 | Oscil6304_0685 | PFAM: PAP_fibrillin. | Hypothetical protein. | 0.638 |
AFY80191.1 | AFY80970.1 | Oscil6304_0444 | Oscil6304_1256 | PFAM: PAP_fibrillin. | Hypothetical protein. | 0.767 |
AFY80191.1 | AFY81252.1 | Oscil6304_0444 | Oscil6304_1550 | PFAM: PAP_fibrillin. | PFAM: Protein of unknown function (DUF3007). | 0.772 |
AFY80191.1 | AFY83735.1 | Oscil6304_0444 | Oscil6304_4207 | PFAM: PAP_fibrillin. | Putative membrane protein; PFAM: NnrU protein; manually curated. | 0.732 |
AFY80191.1 | AFY83926.1 | Oscil6304_0444 | Oscil6304_4406 | PFAM: PAP_fibrillin. | PFAM: Protein of unknown function (DUF1350). | 0.771 |
AFY80191.1 | AFY84214.1 | Oscil6304_0444 | Oscil6304_4703 | PFAM: PAP_fibrillin. | PFAM: Protein of unknown function (DUF3611). | 0.609 |
AFY80191.1 | AFY84884.1 | Oscil6304_0444 | Oscil6304_5396 | PFAM: PAP_fibrillin. | PFAM: Manganese-stabilising protein / photosystem II polypeptide. | 0.745 |
AFY80191.1 | AFY84917.1 | Oscil6304_0444 | Oscil6304_5431 | PFAM: PAP_fibrillin. | Ferredoxin-thioredoxin reductase, catalytic subunit; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | 0.736 |
AFY80191.1 | AFY85325.1 | Oscil6304_0444 | Oscil6304_5858 | PFAM: PAP_fibrillin. | PFAM: BT1 family; TIGRFAM: folate/biopterin transporter. | 0.745 |
AFY80424.1 | AFY80191.1 | Oscil6304_0685 | Oscil6304_0444 | Hypothetical protein. | PFAM: PAP_fibrillin. | 0.638 |
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