STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374305_03139Unannotated protein. (62 aa)    
Predicted Functional Partners:
GCA_000374305_03140
Unannotated protein.
 
     0.853
GCA_000374305_00174
Unannotated protein.
  
     0.546
GCA_000374305_03141
Unannotated protein.
       0.537
GCA_000374305_04935
Unannotated protein.
  
     0.507
GCA_000374305_04067
Unannotated protein.
  
     0.488
GCA_000374305_03138
Unannotated protein.
 
    
0.477
GCA_000374305_01047
Unannotated protein.
  
     0.465
GCA_000374305_00660
Unannotated protein.
  
     0.456
GCA_000374305_02826
Unannotated protein.
  
     0.455
GCA_000374305_03142
Unannotated protein.
       0.436
Your Current Organism:
Actinomadura flavalba
NCBI taxonomy Id: 561175
Other names: A. flavalba DSM 45200, Actinomadura flavalba DSM 45200, Actinomadura flavalba YIM 61435, Actinomadura sp. YIM 61435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.