STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374305_04168Unannotated protein. (647 aa)    
Predicted Functional Partners:
GCA_000374305_04167
Unannotated protein.
 
  0.956
GCA_000374305_04099
Unannotated protein.
  
 0.780
GCA_000374305_05440
Unannotated protein.
  
  0.752
GCA_000374305_03839
Unannotated protein.
  
  0.731
GCA_000374305_02696
Unannotated protein.
  
  0.713
GCA_000374305_03717
Unannotated protein.
  
  0.709
GCA_000374305_00869
Unannotated protein.
  
  0.701
GCA_000374305_03993
Unannotated protein.
  
  0.695
GCA_000374305_01890
Unannotated protein.
  
  0.690
GCA_000374305_01087
Unannotated protein.
  
  0.665
Your Current Organism:
Actinomadura flavalba
NCBI taxonomy Id: 561175
Other names: A. flavalba DSM 45200, Actinomadura flavalba DSM 45200, Actinomadura flavalba YIM 61435, Actinomadura sp. YIM 61435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.