STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE21820.1Teichoic acid transport system ATP-binding protein. (261 aa)    
Predicted Functional Partners:
SEE21788.1
Teichoic acid transport system permease protein.
 
 0.999
SED66521.1
ABC-2 type transport system permease protein.
  
 0.981
SED76555.1
Lipooligosaccharide transport system permease protein.
  
 0.981
SEE18325.1
ABC-2 type transport system permease protein.
  
 0.981
SEF18809.1
Hypothetical protein.
  
 
 0.938
SEE21855.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.887
SEE25549.1
Hypothetical protein.
   
    0.779
SEE23193.1
Glycosyl transferase family 2.
  
 0.769
SEE21749.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.738
xerC
Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
   
    0.653
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.