STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE25008.1Uncharacterized membrane protein YckC, RDD family. (280 aa)    
Predicted Functional Partners:
SEE25191.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
    0.858
SEE25240.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
    0.790
SEE25400.1
Hypothetical protein.
 
     0.778
SEE25318.1
Protein of unknown function.
 
    0.777
SEE25357.1
Protein of unknown function.
 
    0.777
SEE24965.1
Acetyltransferase (GNAT) family protein.
       0.773
SEE25043.1
Subtilase family protein; Belongs to the peptidase S8 family.
       0.537
SEE25278.1
MoxR-like ATPase.
 
    0.475
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.