STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE25240.1Uncharacterized conserved protein, DUF58 family, contains vWF domain. (431 aa)    
Predicted Functional Partners:
SEE25318.1
Protein of unknown function.
 
  
 0.956
SEE25357.1
Protein of unknown function.
 
  
 0.956
SEE25400.1
Hypothetical protein.
 
     0.953
SEE25278.1
MoxR-like ATPase.
  
 0.951
SEE25191.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
  
 0.829
SEE25008.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.790
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
      
 0.682
SEF17969.1
Hypothetical protein.
   
    0.659
SEE25517.1
Sporulation and spore germination.
 
     0.626
SEE40281.1
Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
      
 0.613
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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