STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE30034.1Subtilase family protein. (703 aa)    
Predicted Functional Partners:
SEF14938.1
FtsK/SpoIIIE family protein.
  
 
 0.818
SEF18334.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.818
SEE30003.1
M6 family metalloprotease domain-containing protein.
 
     0.657
SEE55523.1
Streptogrisin C.
  
     0.625
SEE54306.1
Ig-like domain (group 3).
  
 
   0.615
SEF10464.1
Endonuclease/Exonuclease/phosphatase family protein.
  
     0.592
SED80322.1
Hypothetical protein.
  
 
  0.575
SEE74575.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
  
     0.569
SEE46425.1
Choice-of-anchor A domain-containing protein.
    
  0.519
SEF18380.1
LPXTG-motif cell wall anchor domain-containing protein/conserved repeat domain-containing protein.
    
  0.519
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.