STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE31774.1AAA domain-containing protein. (214 aa)    
Predicted Functional Partners:
SEE31700.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.490
SEF16967.1
Hypothetical protein.
  
     0.469
SEF18790.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
  
     0.432
SEF18728.1
Catalytic LigB subunit of aromatic ring-opening dioxygenase.
  
     0.420
SED57217.1
Protein of unknown function.
  
     0.404
SEF17622.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
  
     0.404
SEE31629.1
DNA-binding transcriptional regulator, LacI/PurR family.
       0.403
SEE31665.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
       0.403
SEE31740.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.403
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.