STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE36659.1CsbD-like; Belongs to the UPF0337 (CsbD) family. (57 aa)    
Predicted Functional Partners:
SEE36693.1
DNA-binding transcriptional regulator, MarR family.
       0.613
SEF15431.1
Hypothetical protein.
   
    0.607
SEE21820.1
Teichoic acid transport system ATP-binding protein.
  
    0.545
SEF15886.1
Membrane protein.
 
    0.545
SEF14606.1
Sulfofructosephosphate aldolase.
   
    0.526
SEE18631.1
PPOX class probable F420-dependent enzyme.
  
    0.497
SEE45688.1
PPOX class probable F420-dependent enzyme, Rv3369 family.
  
    0.497
SEE63209.1
PPOX class probable F420-dependent enzyme.
  
    0.497
SEE65927.1
PPOX class probable F420-dependent enzyme.
  
    0.497
SEE70568.1
Pyridoxamine 5'-phosphate oxidase.
  
    0.497
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.