STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE50812.1Repeat domain-containing protein. (179 aa)    
Predicted Functional Partners:
SEF16658.1
Hypothetical protein.
    
  0.888
SEE93343.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
    
 0.691
SEE63830.1
Hypothetical protein.
   
 0.636
SEE63641.1
Hypothetical protein.
    
   0.601
SEF17492.1
Hypothetical protein.
    
   0.601
SEE93939.1
Protein of unknown function.
  
 
   0.581
SEE32701.1
Hypothetical protein.
   
   0.550
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.550
SED59666.1
Subtilase family protein; Belongs to the peptidase S8 family.
  
  0.531
SEE50839.1
NPCBM-associated, NEW3 domain of alpha-galactosidase.
       0.522
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.