STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE51910.14-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. (320 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.900
asd
Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.843
SEE51940.1
Meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase.
  
    0.775
SEE73254.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
  
     0.773
SEF17639.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
  
     0.772
SEF18105.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
  
     0.772
SEE72766.1
N-acetylneuraminate lyase; Belongs to the DapA family.
  
     0.747
SEF16040.1
N-acetylneuraminate lyase; Belongs to the DapA family.
  
     0.736
SEE71072.1
5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
  
     0.728
SEF17801.1
Glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
  0.705
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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