STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE54143.1Uncharacterized conserved protein YgbK, DUF1537 family. (471 aa)    
Predicted Functional Partners:
SEE34308.1
Fructose-bisphosphate aldolase, class II.
     0.929
SEE20692.1
2-hydroxy-3-oxopropionate reductase.
    0.926
SEF16520.1
Fructose-bisphosphate aldolase, class II.
     0.914
SED64023.1
Fructose-bisphosphate aldolase.
     0.845
SEE54170.1
4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
     0.822
SEE54118.1
Xaa-Pro aminopeptidase.
       0.773
SEE54191.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.773
SEE54046.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
       0.668
SEE54069.1
ABC transporter.
       0.668
SEE54094.1
Ribose transport system substrate-binding protein.
       0.668
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.