STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE56554.1Probable F420-dependent oxidoreductase, Rv1855c family; Manually curated. (319 aa)    
Predicted Functional Partners:
SEE24257.1
Coenzyme F420-0 gamma-glutamyl ligase.
 
 
 0.818
SEE56529.1
Sterol 3beta-glucosyltransferase; Manually curated.
       0.773
SEE63185.1
Probable F420-dependent oxidoreductase, Rv2161c family.
  
     0.765
SEE68552.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
     0.757
SEF11800.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
     0.751
SEF16710.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
 0.736
SEE38618.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
 0.732
SEE24312.1
LPPG:FO 2-phospho-L-lactate transferase.
  
   
 0.727
SEE81685.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
     0.725
SEF16106.1
F420-dependent oxidoreductase, MSMEG_4879 family.
  
     0.712
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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