STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE57590.1DNA-binding transcriptional activator of the SARP family. (581 aa)    
Predicted Functional Partners:
SEE57495.1
Lantibiotic dehydratase, C terminus.
 
     0.935
SEE57454.1
Putative peptide zinc metalloprotease protein.
 
     0.934
SEE57516.1
SagB-type dehydrogenase domain-containing protein.
 
     0.923
SEE57387.1
Ribosomal protein S12 methylthiotransferase accessory factor.
 
     0.918
SEE57540.1
Ribosomal protein S12 methylthiotransferase accessory factor.
 
     0.916
SEE57409.1
ABC-2 type transport system permease protein.
 
     0.820
SEE57432.1
ABC-2 type transport system ATP-binding protein.
 
     0.807
SEE57563.1
Bacteriocin biosynthesis cyclodehydratase domain-containing protein.
       0.785
SEE57472.1
Lantibiotic biosynthesis dehydratase C-term.
       0.767
SEE94370.1
Hypothetical protein; Manually curated.
  
    0.563
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.