STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE60201.1Protein of unknown function. (233 aa)    
Predicted Functional Partners:
SEE60952.1
Protein of unknown function.
 
     0.781
SEE92570.1
Protein of unknown function.
  
     0.772
SEE93427.1
MerR HTH family regulatory protein.
  
     0.770
rbpA-2
RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.769
SEE94964.1
Hypothetical protein.
  
     0.764
SEE91987.1
Protein of unknown function; Manually curated.
  
     0.754
SEE85844.1
Protein of unknown function.
  
     0.739
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.737
SEE92658.1
Protein of unknown function.
  
   
 0.737
SEF17901.1
Putative hydrolase.
  
     0.725
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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