STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE65071.1Hypothetical protein. (250 aa)    
Predicted Functional Partners:
SEE65096.1
tRNA G18 (ribose-2'-O)-methylase SpoU.
       0.797
SEE65047.1
Regulator of protease activity HflC, stomatin/prohibitin superfamily.
       0.786
SEF09671.1
Uroporphyrinogen III methyltransferase / synthase.
    
  0.639
SEE65005.1
Iron complex transport system ATP-binding protein.
       0.624
SEE65027.1
Membrane protein implicated in regulation of membrane protease activity.
       0.610
SEE65118.1
Hypothetical protein.
  
    0.605
SEE64986.1
Hypothetical protein.
       0.481
pheT
phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.459
SEE91684.1
uroporphyrinogen-III C-methyltransferase.
    
  0.439
SEF12454.1
uroporphyrinogen-III C-methyltransferase.
    
  0.439
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.