STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE66708.1Choline dehydrogenase. (517 aa)    
Predicted Functional Partners:
SEE61487.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
   
 0.886
SEE85111.1
Predicted dehydrogenase.
    
 0.822
SEF18831.1
Predicted dehydrogenase.
    
 0.822
SEF17009.1
SH3 domain-containing protein.
    
  0.817
SEF13796.1
Hypothetical protein.
   
 
 0.807
SED83997.1
Ankyrin repeat-containing protein.
    
 0.799
SEE45509.1
Hypothetical protein.
    
 0.799
SEE68863.1
Hypothetical protein.
    
 0.799
SEE66684.1
NADH dehydrogenase.
       0.757
SED75310.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
 0.725
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.