STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE68160.1Beta-lactamase. (368 aa)    
Predicted Functional Partners:
SEF14838.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.559
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.550
SEE68180.1
Hypothetical protein.
       0.540
SEE76422.1
D-alanyl-D-alanine carboxypeptidase.
  
     0.460
SEF09800.1
LD-carboxypeptidase LdcB, LAS superfamily.
  
 
 0.451
SED68206.1
CubicO group peptidase, beta-lactamase class C family.
  
     0.432
SED57358.1
Muramoyltetrapeptide carboxypeptidase.
    
  0.400
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.