STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE69378.1Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (330 aa)    
Predicted Functional Partners:
SEE69357.1
Peptide/nickel transport system permease protein.
 
  0.951
SEE69402.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.904
SEE69309.1
Peptide/nickel transport system substrate-binding protein.
  
 
  0.845
SEE69334.1
Peptide/nickel transport system permease protein.
 
 
  0.835
SEE69425.1
Threonine synthase.
       0.773
SEE69459.1
Hypothetical protein.
       0.773
SEE69488.1
Transcriptional regulator, IclR family.
       0.773
SEE87378.1
Oligopeptide transport system permease protein.
 
 
  0.769
SEE44229.1
Peptide/nickel transport system permease protein.
 
 
  0.760
SEE67803.1
Peptide/nickel transport system permease protein.
 
 
  0.729
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.