STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE78605.1Predicted amidohydrolase. (299 aa)    
Predicted Functional Partners:
SED81015.1
Glutamate synthase (NADH) large subunit.
    
 0.815
SEF16185.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
 
 
 0.773
SEF18802.1
Agmatinase; Belongs to the arginase family.
  
 0.726
SEE78860.1
N-methylhydantoinase B.
 
  
  0.718
SEE78555.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.705
SEE78580.1
PIN domain nuclease, a component of toxin-antitoxin system (PIN domain).
       0.705
SEE78502.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 
     0.704
SEF18741.1
Monoamine oxidase.
  
 
 0.703
SEE32812.1
4-hydroxyphenylpyruvate dioxygenase.
   
 0.701
SEF18392.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.686
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.