STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE85008.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (223 aa)    
Predicted Functional Partners:
SEE84985.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
  0.975
SEF18471.1
Two-component system, OmpR family, sensor histidine kinase MprB.
  
 0.916
SEF10783.1
Hypothetical protein.
 0.896
SEF18480.1
Signal transduction histidine kinase.
 0.896
SEE78356.1
Signal transduction histidine kinase.
 
  0.889
SEF12597.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.887
SEE88373.1
Signal transduction histidine kinase.
 0.885
SEF16265.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 0.875
SEF17263.1
Two-component system, OmpR family, sensor kinase.
 0.868
SEF15862.1
Two-component system, OmpR family, sensor histidine kinase BaeS.
  0.852
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.