STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE86299.1Ammonium transporter, Amt family. (431 aa)    
Predicted Functional Partners:
SEE86281.1
Nitrogen regulatory protein P-II family.
 0.999
SED81015.1
Glutamate synthase (NADH) large subunit.
 
  
 0.914
SEF15918.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
   
  0.837
glnD
UTP--GlnB (protein PII) uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.
 
   
 0.777
SEE60158.1
L-glutamine synthetase.
  
  
 0.590
SEE59717.1
L-glutamine synthetase.
  
  
 0.578
SEF18893.1
Aspartate ammonia-lyase.
   
  
 0.566
SEE88089.1
ANTAR domain-containing protein.
  
 
 0.486
SEE92258.1
Aconitase.
  
 
 0.469
SED81051.1
Glutamate synthase (NADH) small subunit.
 
  
 0.429
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.