STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE87693.1Predicted amidohydrolase. (265 aa)    
Predicted Functional Partners:
SED81015.1
Glutamate synthase (NADH) large subunit.
 
  
 0.840
SEE87659.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
  
    0.781
SEE87677.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
  
    0.781
SEE87611.1
N-acetylglucosamine transport system permease protein.
       0.773
SEE87627.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.773
SEE87643.1
Hypothetical protein.
       0.773
SEF16185.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
 
 
 0.757
SEF18802.1
Agmatinase; Belongs to the arginase family.
  
 0.726
SED81051.1
Glutamate synthase (NADH) small subunit.
 
  0.713
SEF18741.1
Monoamine oxidase.
  
 
 0.703
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.