STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE88493.1Transcriptional regulator, AbiEi antitoxin, Type IV TA system. (311 aa)    
Predicted Functional Partners:
SEF17439.1
Cystathionine beta-synthase.
    
  0.657
SEF18321.1
Transcriptional regulator, AbiEi antitoxin, Type IV TA system.
  
     0.596
SED81015.1
Glutamate synthase (NADH) large subunit.
   
    0.592
SEE88473.1
DNA-binding transcriptional regulator, LacI/PurR family.
       0.559
SEE88509.1
Putative multiple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.495
SEE88526.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
       0.495
SEE88547.1
Putative multiple sugar transport system substrate-binding protein.
       0.494
SED66697.1
TIGR03086 family protein.
  
     0.448
SEF18072.1
DNA-binding transcriptional regulator, MarR family.
  
     0.445
SEE23904.1
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase.
  
     0.432
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.