STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE92673.13',5'-cyclic AMP phosphodiesterase CpdA. (1262 aa)    
Predicted Functional Partners:
SEF14838.1
N-acetylmuramoyl-L-alanine amidase.
    
  0.806
SEE45509.1
Hypothetical protein.
  
  0.683
SEF12165.1
5'-nucleotidase.
    
 0.670
SEE77388.1
PAS domain S-box-containing protein.
     
 0.657
SED79566.1
Transcriptional activator domain-containing protein.
    
  0.655
SED83997.1
Ankyrin repeat-containing protein.
   
  0.640
SEE68863.1
Hypothetical protein.
   
  0.640
SEE36343.1
Heparinase II/III-like protein.
    
  0.637
SEF16253.1
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein.
    
  0.618
SEE55576.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.614
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.