STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE92918.1Integral membrane protein; Manually curated. (103 aa)    
Predicted Functional Partners:
SEF12065.1
Hypothetical protein.
   
    0.777
SEE92934.1
Adenylate cyclase, class 3.
       0.709
SEE92948.1
Thioredoxin reductase (NADPH).
       0.709
SEF17854.1
Protein of unknown function.
  
     0.586
SEF16089.1
Protein of unknown function.
  
     0.558
SEE61487.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
  
     0.528
SEE92965.1
Ribosome-associated protein.
       0.500
SEE71439.1
Putative copper resistance protein D.
  
     0.496
SEE57115.1
[acyl-carrier-protein] S-malonyltransferase.
  
     0.485
SEF17279.1
RND family efflux transporter, MFP subunit.
   
  0.450
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.