STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF08413.1Sialidase-1. (610 aa)    
Predicted Functional Partners:
SEF08419.1
Hypothetical protein.
 
     0.802
SEF17641.1
Sialidase-1.
 
  
 
0.780
SEF17366.1
Beta-galactosidase.
  
 0.703
SEE36376.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
  
  
  0.682
SEE66226.1
Alpha-galactosidase.
  
  
  0.675
SEE69285.1
BNR repeat-like domain-containing protein.
  
     0.664
SEE57902.1
Uncharacterized sulfatase.
  
 
  0.647
SEE72766.1
N-acetylneuraminate lyase; Belongs to the DapA family.
  
     0.643
SEF08407.1
F420-dependent oxidoreductase, G6PDH family.
       0.642
SEE52161.1
Alpha-galactosidase.
  
  
  0.640
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.