STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF08705.1GAF domain-containing protein. (640 aa)    
Predicted Functional Partners:
SEF08699.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.964
SEF08734.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.913
SEE42141.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains; Manually curated.
  
  0.845
SEF18084.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.842
SEF10125.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.840
SEF13489.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.839
SEE93370.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.838
SEE32034.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.818
SEF08693.1
Response regulator receiver domain-containing protein.
 
  0.816
SEE19253.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.813
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.