STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF09157.1FAD/FMN-containing dehydrogenase. (429 aa)    
Predicted Functional Partners:
SEF09149.1
Protein N-acetyltransferase, RimJ/RimL family.
       0.773
SEE61487.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
    
  0.760
SED81015.1
Glutamate synthase (NADH) large subunit.
    
 0.714
SEE41563.1
Electron transfer flavoprotein beta subunit.
  
 
 0.600
SEE41593.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.597
SEF09143.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
    
  0.556
SEE83236.1
2-oxoisovalerate dehydrogenase E1 component.
    
 0.537
SEF18737.1
2-oxoisovalerate dehydrogenase E1 component.
    
 0.537
SEF18130.1
Phosphoglycolate phosphatase.
    
  0.532
SEF15966.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.492
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.