STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF11361.1Glycine betaine/proline transport system substrate-binding protein. (339 aa)    
Predicted Functional Partners:
SEF11346.1
Glycine betaine/proline transport system ATP-binding protein.
 0.999
SEF11353.1
Glycine betaine/proline transport system permease protein.
 
 0.999
SEE60538.1
Choline/carnitine/betaine transport; Manually curated; Belongs to the BCCT transporter (TC 2.A.15) family.
    
 0.654
SEF16126.1
Osmoprotectant transport system permease protein.
 
 
 0.610
SEF16124.1
Osmoprotectant transport system permease protein.
 
 
 0.592
SEF16128.1
Osmoprotectant transport system substrate-binding protein.
  
 
 0.544
SEE46824.1
Peptide/nickel transport system substrate-binding protein.
  
  
  0.454
SEF18456.1
ABC-type transport system, substrate-binding protein.
  
  
  0.452
purN
Phosphoribosylglycinamide formyltransferase-1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
    0.443
SEE84352.1
Glycine betaine/proline transport system substrate-binding protein.
  
  
 
0.420
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.