STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF11730.1L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. (223 aa)    
Predicted Functional Partners:
SEF11738.1
cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
       0.773
SEF11723.1
Hypothetical protein.
       0.697
SEF14106.1
PTS system IIA component, L-Asc family.
 
  
 0.669
SEF14113.1
PTS system, ascorbate-specific IIC component.
  
 
 0.660
SEF14109.1
PTS system, ascorbate-specific IIB component.
  
 
 0.633
SEF11746.1
Putative ABC transport system permease protein.
       0.567
SEE24218.1
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase.
 
     0.519
SEF16817.1
Hypothetical protein.
    
  0.495
SEE41899.1
Cobalamin-independent synthase, Catalytic domain.
 
 
   0.458
SEF09793.1
Sugar phosphate isomerase/epimerase.
 
     0.412
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.