STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF12511.1Membrane carboxypeptidase (penicillin-binding protein). (819 aa)    
Predicted Functional Partners:
SED78712.1
Peptidoglycan synthetase FtsI.
 
 
 0.970
SEF14652.1
Cell elongation-specific peptidoglycan D,D-transpeptidase.
 
 
0.933
SEF18367.1
Hypothetical protein.
    
 0.916
SEE62565.1
Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.908
SED79292.1
DivIVA domain-containing protein.
   
 
 0.906
SED78895.1
Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family.
  
 
 0.852
murG
UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
 
 0.815
SEF17076.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
 
 
 0.796
SEF13242.1
Membrane carboxypeptidase (penicillin-binding protein).
  
  
0.790
SEF14649.1
Cell division protein FtsW, lipid II flippase; Belongs to the SEDS family.
  
 
 0.788
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.