STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF13375.1GntR family transcriptional regulator. (253 aa)    
Predicted Functional Partners:
SEE49898.1
GntR family transcriptional regulator, phosphonate transport system regulatory protein.
  
     0.773
SEF17359.1
Transcriptional regulator, GntR family.
  
     0.772
SEF14406.1
Transcriptional regulator, GntR family.
  
     0.708
SEF13383.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
   
   0.657
SEF13392.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.623
SEF13400.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.623
SEF13408.1
BadF-type ATPase.
       0.623
SEF13417.1
N-acylglucosamine-6-phosphate 2-epimerase.
       0.623
SEF13424.1
Hypothetical protein.
       0.623
SEF13431.1
Uncharacterized protein, contains SIS (Sugar ISomerase) phosphosugar binding domain.
       0.623
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.