STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF14255.1DNA-binding transcriptional regulator, Lrp family. (339 aa)    
Predicted Functional Partners:
SEF18241.1
NPCBM-associated, NEW3 domain of alpha-galactosidase.
  
     0.634
SEF09256.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.629
SEF18239.1
NPCBM-associated, NEW3 domain of alpha-galactosidase.
  
     0.628
SEE91684.1
uroporphyrinogen-III C-methyltransferase.
  
 
  0.594
SEF12454.1
uroporphyrinogen-III C-methyltransferase.
  
 
  0.594
SEF14251.1
GrpB domain, predicted nucleotidyltransferase, UPF0157 family.
       0.568
SEF14259.1
Multiple sugar transport system substrate-binding protein.
       0.536
SEF14264.1
Multiple sugar transport system permease protein.
       0.536
SEF14267.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.536
SEF14271.1
Oxidoreductase family, C-terminal alpha/beta domain.
       0.536
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.