STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF14406.1Transcriptional regulator, GntR family. (255 aa)    
Predicted Functional Partners:
SEF14410.1
Uncharacterized SAM-binding protein YcdF, DUF218 family.
 
     0.828
SEF18710.1
Transcriptional regulator, GntR family.
  
     0.716
SEE89366.1
Transcriptional regulator, GntR family.
  
     0.713
SEF13375.1
GntR family transcriptional regulator.
  
     0.708
SEF16009.1
GntR family transcriptional regulator.
  
     0.702
SEF16352.1
Transcriptional regulator, GntR family; Manually curated.
  
     0.701
SEF18807.1
Transcriptional regulator, GntR family.
  
     0.699
SED63797.1
Transcriptional regulator, GntR family.
  
     0.697
SEE49898.1
GntR family transcriptional regulator, phosphonate transport system regulatory protein.
  
     0.694
SEF17376.1
Transcriptional regulator, GntR family.
  
     0.685
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.