STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF14935.1Hypothetical protein. (530 aa)    
Predicted Functional Partners:
SEF14938.1
FtsK/SpoIIIE family protein.
       0.773
SEF16589.1
Protein of unknown function.
  
     0.736
SEE37821.1
Hypothetical protein.
  
     0.729
SED76728.1
Hypothetical protein.
  
     0.721
SEF14492.1
Hypothetical protein.
  
     0.705
SEF18088.1
Calpain family cysteine protease.
  
     0.634
SEF09000.1
NAD:arginine ADP-ribosyltransferase.
  
     0.633
SED75115.1
Nitric-oxide synthase; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.
  
     0.630
SEF11422.1
alpha-N-acetylglucosaminidase.
  
     0.626
SEF16376.1
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.607
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.