STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF15511.1Phenylacetic acid degradation protein paaN. (559 aa)    
Predicted Functional Partners:
SED81015.1
Glutamate synthase (NADH) large subunit.
  
 
 0.837
SED75310.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 
 0.832
SEF15509.1
3-hydroxybutyryl-CoA dehydrogenase.
 
  0.749
SEF09256.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 0.709
SEF18033.1
2-oxoglutarate dehydrogenase E1 component.
   
 0.706
SEE17239.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.704
SEE45968.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.679
SEF18355.1
3-hydroxyisobutyrate dehydrogenase.
 
 0.676
SEE68141.1
Indolepyruvate ferredoxin oxidoreductase.
    
 0.667
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.667
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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