STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF16081.1DNA-binding transcriptional regulator, FadR family. (241 aa)    
Predicted Functional Partners:
SEF15290.1
DNA-binding transcriptional regulator, FadR family.
  
     0.767
SEF15547.1
DNA-binding transcriptional regulator, GntR family.
  
    0.721
SEF10597.1
DNA-binding transcriptional regulator, GntR family.
  
    0.697
SEE70206.1
DNA-binding transcriptional regulator, GntR family.
  
    0.694
SEE87966.1
DNA-binding transcriptional regulator, GntR family.
  
    0.687
SEE68840.1
DNA-binding transcriptional regulator, GntR family.
  
    0.670
SEF17359.1
Transcriptional regulator, GntR family.
  
    0.663
SED75310.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
  0.641
SEF18107.1
Transcriptional regulator, GntR family.
  
    0.624
SEF18807.1
Transcriptional regulator, GntR family.
  
    0.612
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.