STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF16235.1Hypothetical protein. (237 aa)    
Predicted Functional Partners:
SEF16237.1
Predicted NAD/FAD-binding protein.
  
 0.996
SEF16233.1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.995
SEF16231.1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.992
SEF16229.1
Steroid 5-alpha reductase family enzyme.
 
     0.955
SEF17330.1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.945
SEF16239.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
     0.738
SEF16241.1
Anti-sigma-K factor RskA.
 
     0.717
SED75824.1
Alpha/beta hydrolase family protein.
 
     0.657
SEF16219.1
Uncaracterized surface protein containing fasciclin (FAS1) repeats.
 
    0.546
SEF16227.1
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
 
     0.446
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.