STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF16446.1(+)-trans-carveol dehydrogenase. (278 aa)    
Predicted Functional Partners:
SEF16435.1
Putative mycofactocin binding protein MftB.
 
     0.917
SEF16438.1
Mycofactocin radical SAM maturase.
 
     0.910
SEF16457.1
Mycofactocin system glycosyltransferase.
 
 
  0.907
SEF16452.1
Von Willebrand factor type A domain-containing protein.
 
     0.881
SEF16449.1
MoxR-like ATPase.
 
     0.866
SEF16427.1
Mycofactocin system glycosyltransferase.
 
 
  0.821
SED75310.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.813
SEF16429.1
Mycofactocin system transcriptional regulator.
 
     0.813
SEE57115.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.798
SEF16454.1
Creatinine amidohydrolase.
 
     0.793
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.