STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF16650.1DNA-binding transcriptional regulator, ArsR family. (112 aa)    
Predicted Functional Partners:
SEF16652.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.946
SEF16648.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.829
SEF14324.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.714
SEF16654.1
Protein N-acetyltransferase, RimJ/RimL family.
       0.556
SEF18667.1
DNA-binding transcriptional regulator, ArsR family.
  
     0.534
SEF18363.1
AraC-type DNA-binding protein.
  
     0.523
SEF16656.1
Transposase DDE domain-containing protein.
       0.484
SEF15747.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.479
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.