STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF17164.1N-acetylglucosaminyl deacetylase, LmbE family. (212 aa)    
Predicted Functional Partners:
SEF17158.1
Nucleoside-diphosphate-sugar epimerase.
 
     0.952
SEF17160.1
Methyltransferase domain-containing protein.
 
     0.952
SEF17162.1
Glucose-1-phosphate cytidylyltransferase.
 
     0.952
SEF17193.1
C-methyltransferase C-terminal domain-containing protein.
 
     0.759
SEF17191.1
Putative zinc binding domain-containing protein.
 
     0.744
mshC
L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily.
  
 
 0.664
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.598
SEE74953.1
Regulator of RNase E activity RraA.
    
  0.548
SEF10641.1
Regulator of RNase E activity RraA.
    
  0.548
SEF14101.1
Regulator of RNase E activity RraA.
    
  0.548
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.