STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF17647.1Acetamidase/formamidase. (332 aa)    
Predicted Functional Partners:
SEF17645.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    0.910
SED81015.1
Glutamate synthase (NADH) large subunit.
     
 0.807
SEE60158.1
L-glutamine synthetase.
     
 0.784
SEE59717.1
L-glutamine synthetase.
     
 0.783
SEE32812.1
4-hydroxyphenylpyruvate dioxygenase.
     
 0.782
SEF17649.1
4a-hydroxytetrahydrobiopterin dehydratase.
       0.773
SEF17651.1
Succinate dehydrogenase subunit B.
       0.773
SEF18679.1
Amidase.
  
 
 0.764
SEF17653.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
       0.701
SEF15574.1
Malate synthase; Belongs to the malate synthase family.
     
 0.700
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.