STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF17711.1Hypothetical protein. (325 aa)    
Predicted Functional Partners:
SEF17709.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
     
 0.782
SEF16253.1
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein.
 
  
 0.762
SEF17707.1
Hypothetical protein.
       0.757
dapD
2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.
 
     0.753
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.730
SEE92762.1
Hypothetical protein.
  
     0.718
SEF18315.1
IMP dehydrogenase.
    
  0.690
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.674
SEF16983.1
Peptidase family M23.
 
 
 0.621
SEF14838.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.618
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.