STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF18103.1Hypothetical protein. (303 aa)    
Predicted Functional Partners:
SEF18101.1
Hypothetical protein.
       0.722
SEF18099.1
Lactonase, 7-bladed beta-propeller.
       0.709
SEF18105.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
       0.636
SEF18107.1
Transcriptional regulator, GntR family.
       0.636
SEF18109.1
Putative aldouronate transport system substrate-binding protein.
       0.443
SEF18111.1
Uncharacterized membrane protein YesL.
       0.432
SEF18113.1
Putative aldouronate transport system permease protein.
       0.432
SEF18115.1
Putative aldouronate transport system permease protein.
       0.432
SEF18117.1
Lysophospholipase L1.
       0.432
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.