STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF18468.1Putative ABC transport system ATP-binding protein. (235 aa)    
Predicted Functional Partners:
SEF18467.1
Putative ABC transport system permease protein.
  0.996
SEF17271.1
Putative ABC transport system permease protein.
  0.993
SEF18485.1
Putative ABC transport system permease protein.
  0.984
SEF15872.1
Putative ABC transport system permease protein.
  0.972
SEF18469.1
Putative peptidoglycan binding domain-containing protein.
 
  0.947
SEE77118.1
Putative ABC transport system permease protein.
  0.929
SED80401.1
Putative ABC transport system ATP-binding protein.
 
     
0.898
SEE82062.1
Putative ABC transport system permease protein.
 
  0.894
SEF13019.1
Putative ABC transport system permease protein.
  
  0.864
SEE88715.1
ABC-type multidrug transport system, ATPase and permease component.
 
    
0.857
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.