STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF18486.1NPCBM-associated, NEW3 domain of alpha-galactosidase. (897 aa)    
Predicted Functional Partners:
SEF18489.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.913
SEF18487.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.908
SEF18488.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.907
SEF18492.1
6-phospho-beta-glucosidase.
 
  
  0.761
SEF18490.1
Sugar or nucleoside kinase, ribokinase family.
 
  
  0.732
SEE24053.1
Raffinose/stachyose/melibiose transport system permease protein.
 
     0.690
SEE24095.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
     0.684
SEF11437.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
     0.672
SEF11445.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.661
SEF11454.1
Raffinose/stachyose/melibiose transport system permease protein.
  
     0.570
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.