STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF18541.1DNA-binding transcriptional regulator, LacI/PurR family. (354 aa)    
Predicted Functional Partners:
SEF18542.1
FAD dependent oxidoreductase.
 
 
   0.911
SED81015.1
Glutamate synthase (NADH) large subunit.
    
 
 0.805
SEF18537.1
Peptide/nickel transport system permease protein.
       0.773
SEF18538.1
Peptide/nickel transport system permease protein.
       0.773
SEF18539.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.773
SEF18540.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.773
SEF18850.1
Transcriptional regulator, LacI family.
  
     0.773
SEF17363.1
Transcriptional regulator, LacI family.
  
     0.772
SEE54800.1
Transcriptional regulator, LacI family.
  
     0.759
SED64071.1
LacI family transcriptional regulator.
  
     0.758
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.