STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF18657.1Hypothetical protein. (290 aa)    
Predicted Functional Partners:
SEF18654.1
4-hydroxybenzoate polyprenyltransferase.
 
   
 0.957
SEF18659.1
Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.
 
   
 0.957
SEF18656.1
Hypothetical protein.
 
    0.956
SEF18658.1
Xylose isomerase-like TIM barrel.
 
    0.956
SEF18655.1
Sugar phosphate isomerase/epimerase.
 
    0.954
SEF18653.1
Myo-inositol-1-phosphate synthase.
 
     0.948
SEF18652.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
     0.894
SEF18661.1
Sugar phosphate isomerase/epimerase.
 
    0.845
SED77220.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
     0.829
SEF10185.1
Protein of unknown function.
 
     0.829
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.